Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 TFAMP1-201ENST00000412727 736 ntBASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 PRYP6-201ENST00000514804 343 ntBASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 AL135744.1-201ENST00000565098 629 ntBASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGC3Q9UN70 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGC3Q9UN70 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGC3Q9UN70 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 AC079328.2-201ENST00000561241 3354 ntBASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGC3Q9UN70 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 RN7SL832P-201ENST00000607781 1756 ntBASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 RN7SL589P-201ENST00000481268 310 ntBASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGC3Q9UN70 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms