Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 KRT8P22-201ENST00000562317 1415 ntBASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 AC099336.1-201ENST00000417053 1171 ntBASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 ACTG1P3-201ENST00000431775 1114 ntBASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 MIR6869-201ENST00000619434 62 ntBASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.52■□□□□ 0.87
CNTNAP4Q9C0A0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 TUBB1P2-201ENST00000422712 1306 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 TUBB1P1-201ENST00000503144 1300 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 KLF2P4-201ENST00000451959 1225 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 BRI3BPP1-201ENST00000594224 787 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 MIR6787-201ENST00000616675 61 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 CU634019.7-201ENST00000624153 1185 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 FP236241.2-201ENST00000624906 1185 ntBASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNTNAP4Q9C0A0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AC005622.1-201ENST00000636801 1703 ntBASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.5■□□□□ 0.87
CNTNAP4Q9C0A0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 PP12613-201ENST00000424958 2230 ntBASIC20.49■□□□□ 0.87
CNTNAP4Q9C0A0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms