Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 TSPY26P-202ENST00000565928 3884 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 HTR5BP-201ENST00000430851 1154 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 AP006288.1-201ENST00000446065 395 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 AC112191.1-201ENST00000523689 701 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 AL031432.2-201ENST00000566714 459 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 AC018845.2-201ENST00000568326 409 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 AL928711.1-201ENST00000570165 459 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 AL691403.2-201ENST00000618460 490 ntBASIC14.87□□□□□ -0.03
USB1Q9BQ65 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
USB1Q9BQ65 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.87□□□□□ -0.03
USB1Q9BQ65 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 AL021920.2-201ENST00000624828 1351 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 AC002056.1-201ENST00000395613 760 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 AC254562.1-201ENST00000417586 456 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 HCG4-201ENST00000418983 998 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 SLC25A6P2-201ENST00000497974 877 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 MIR4515-201ENST00000584082 81 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 AC068137.2-201ENST00000605408 478 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 AL513190.1-201ENST00000621254 727 ntBASIC14.86□□□□□ -0.03
USB1Q9BQ65 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
USB1Q9BQ65 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
USB1Q9BQ65 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms