Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 AL603756.1-201ENST00000606511 2163 ntBASIC12.31□□□□□ -0.44
CMC4P56277 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.31□□□□□ -0.44
CMC4P56277 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.31□□□□□ -0.44
CMC4P56277 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.31□□□□□ -0.44
CMC4P56277 AL135744.1-201ENST00000565098 629 ntBASIC12.31□□□□□ -0.44
CMC4P56277 MIR4469-201ENST00000583919 79 ntBASIC12.31□□□□□ -0.44
CMC4P56277 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.31□□□□□ -0.44
CMC4P56277 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.31□□□□□ -0.44
CMC4P56277 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.31□□□□□ -0.44
CMC4P56277 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CMC4P56277 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CMC4P56277 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.31□□□□□ -0.44
CMC4P56277 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CMC4P56277 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.3□□□□□ -0.44
CMC4P56277 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.3□□□□□ -0.44
CMC4P56277 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.3□□□□□ -0.44
CMC4P56277 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
CMC4P56277 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 AL592309.1-201ENST00000443127 649 ntBASIC12.3□□□□□ -0.44
CMC4P56277 TIMM8BP1-201ENST00000452384 211 ntBASIC12.3□□□□□ -0.44
CMC4P56277 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 PRYP6-201ENST00000514804 343 ntBASIC12.3□□□□□ -0.44
CMC4P56277 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.3□□□□□ -0.44
CMC4P56277 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.3□□□□□ -0.44
CMC4P56277 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.3□□□□□ -0.44
CMC4P56277 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 AC099522.2-201ENST00000607001 744 ntBASIC12.3□□□□□ -0.44
CMC4P56277 AL365330.1-201ENST00000607459 531 ntBASIC12.3□□□□□ -0.44
CMC4P56277 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms