Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 U82695.1-201ENST00000635752 1889 ntBASIC18.64■□□□□ 0.57
USP11P51784 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
USP11P51784 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP11P51784 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.64■□□□□ 0.57
USP11P51784 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP11P51784 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
USP11P51784 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.63■□□□□ 0.57
USP11P51784 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.63■□□□□ 0.57
USP11P51784 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
USP11P51784 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.63■□□□□ 0.57
USP11P51784 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.63■□□□□ 0.57
USP11P51784 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
USP11P51784 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP11P51784 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.62■□□□□ 0.57
USP11P51784 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.62■□□□□ 0.57
USP11P51784 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.62■□□□□ 0.57
USP11P51784 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 FAM220BP-201ENST00000377689 816 ntBASIC18.62■□□□□ 0.57
USP11P51784 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.62■□□□□ 0.57
USP11P51784 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 AC092183.1-201ENST00000469884 875 ntBASIC18.62■□□□□ 0.57
USP11P51784 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.62■□□□□ 0.57
USP11P51784 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.62■□□□□ 0.57
USP11P51784 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.62■□□□□ 0.57
USP11P51784 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.62■□□□□ 0.57
USP11P51784 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.62■□□□□ 0.57
USP11P51784 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.62■□□□□ 0.57
USP11P51784 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
USP11P51784 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP11P51784 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 AL139400.1-201ENST00000366220 510 ntBASIC18.61■□□□□ 0.57
USP11P51784 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.61■□□□□ 0.57
USP11P51784 TSEN15P1-201ENST00000423257 515 ntBASIC18.61■□□□□ 0.57
USP11P51784 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms