Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HOXC8P31273 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HOXC8P31273 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HOXC8P31273 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 MYCLP2-201ENST00000449268 967 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 AC245100.5-201ENST00000452108 331 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 RN7SL837P-201ENST00000463010 287 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 POU5F1P6-201ENST00000466990 990 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 AC011495.1-201ENST00000498085 584 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC8P31273 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXC8P31273 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXC8P31273 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 RNF216P1-203ENST00000404404 2427 ntBASIC17.81■□□□□ 0.44
HOXC8P31273 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HOXC8P31273 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXC8P31273 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC8P31273 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC8P31273 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC8P31273 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC8P31273 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC8P31273 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXC8P31273 AC123567.1-201ENST00000548294 1261 ntBASIC17.8■□□□□ 0.44
HOXC8P31273 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXC8P31273 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXC8P31273 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXC8P31273 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 AL592424.1-201ENST00000563624 1536 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXC8P31273 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 IGHV3-71-201ENST00000523324 359 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.79■□□□□ 0.44
HOXC8P31273 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC8P31273 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.79■□□□□ 0.44
HOXC8P31273 HILS1-202ENST00000545329 423 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXC8P31273 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC8P31273 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.79■□□□□ 0.44
HOXC8P31273 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HOXC8P31273 TMEM261P1-201ENST00000604899 340 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC8P31273 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC8P31273 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HOXC8P31273 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.79■□□□□ 0.44
HOXC8P31273 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 AL691432.1-201ENST00000596308 1422 ntBASIC17.79■□□□□ 0.44
HOXC8P31273 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HOXC8P31273 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms