Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.37■□□□□ 0.37
MMP8P22894 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MMP8P22894 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MMP8P22894 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP8P22894 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP8P22894 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 AC002056.1-201ENST00000395613 760 ntBASIC17.36■□□□□ 0.37
MMP8P22894 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP8P22894 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
MMP8P22894 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.36■□□□□ 0.37
MMP8P22894 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP8P22894 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MMP8P22894 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 AC099522.2-201ENST00000607001 744 ntBASIC17.36■□□□□ 0.37
MMP8P22894 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MMP8P22894 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 AL161645.1-201ENST00000622716 1255 ntBASIC17.36■□□□□ 0.37
MMP8P22894 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.36■□□□□ 0.37
MMP8P22894 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 WASH6P-202ENST00000359512 1437 ntBASIC17.36■□□□□ 0.37
MMP8P22894 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MMP8P22894 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MMP8P22894 U82695.1-201ENST00000635752 1889 ntBASIC17.35■□□□□ 0.37
MMP8P22894 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 MIR574-201ENST00000385209 96 ntBASIC17.35■□□□□ 0.37
MMP8P22894 AL022342.1-201ENST00000400363 863 ntBASIC17.35■□□□□ 0.37
MMP8P22894 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 LINC02199-201ENST00000506655 2702 ntBASIC17.35■□□□□ 0.37
MMP8P22894 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP8P22894 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP8P22894 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP8P22894 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP8P22894 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP8P22894 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP8P22894 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms