Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.18■□□□□ 0.5
CD4P01730 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CD4P01730 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CD4P01730 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
CD4P01730 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.17■□□□□ 0.5
CD4P01730 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CD4P01730 RN7SL618P-201ENST00000477850 296 ntBASIC18.17■□□□□ 0.5
CD4P01730 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 AC011495.1-201ENST00000498085 584 ntBASIC18.17■□□□□ 0.5
CD4P01730 SPDYE18-201ENST00000510091 1050 ntBASIC18.17■□□□□ 0.5
CD4P01730 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.17■□□□□ 0.5
CD4P01730 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.17■□□□□ 0.5
CD4P01730 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.17■□□□□ 0.5
CD4P01730 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.17■□□□□ 0.5
CD4P01730 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.17■□□□□ 0.5
CD4P01730 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD4P01730 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.17■□□□□ 0.5
CD4P01730 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
CD4P01730 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CD4P01730 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.16■□□□□ 0.5
CD4P01730 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.16■□□□□ 0.5
CD4P01730 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CD4P01730 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.16■□□□□ 0.5
CD4P01730 AC114501.2-201ENST00000439631 535 ntBASIC18.16■□□□□ 0.5
CD4P01730 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.16■□□□□ 0.5
CD4P01730 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.16■□□□□ 0.5
CD4P01730 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CD4P01730 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD4P01730 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.16■□□□□ 0.5
CD4P01730 SLC7A15P-201ENST00000424028 1363 ntBASIC18.16■□□□□ 0.5
CD4P01730 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.15■□□□□ 0.5
CD4P01730 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.15■□□□□ 0.5
CD4P01730 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.15■□□□□ 0.5
CD4P01730 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 KRT17P8-201ENST00000540749 863 ntBASIC18.15■□□□□ 0.5
CD4P01730 AC044860.1-202ENST00000559481 777 ntBASIC18.15■□□□□ 0.5
CD4P01730 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.15■□□□□ 0.5
CD4P01730 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CD4P01730 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.15■□□□□ 0.5
CD4P01730 MIR6805-201ENST00000615055 62 ntBASIC18.15■□□□□ 0.5
CD4P01730 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CD4P01730 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CD4P01730 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.15■□□□□ 0.5
CD4P01730 AL671710.1-201ENST00000610245 2349 ntBASIC18.15■□□□□ 0.5
CD4P01730 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD4P01730 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CD4P01730 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms