Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NPIPB4C9JG80 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 PCDHA1-201ENST00000378133 2726 ntBASIC14.61□□□□□ -0.07
NPIPB4C9JG80 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 AC112191.1-201ENST00000523689 701 ntBASIC14.61□□□□□ -0.07
NPIPB4C9JG80 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 AC018845.2-201ENST00000568326 409 ntBASIC14.61□□□□□ -0.07
NPIPB4C9JG80 AP002472.1-201ENST00000577490 586 ntBASIC14.61□□□□□ -0.07
NPIPB4C9JG80 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NPIPB4C9JG80 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 AC073439.1-201ENST00000624121 1774 ntBASIC14.6□□□□□ -0.07
NPIPB4C9JG80 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 MED15P5-201ENST00000423150 992 ntBASIC14.6□□□□□ -0.07
NPIPB4C9JG80 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 AC007967.2-201ENST00000432613 625 ntBASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 PCDH8P1-201ENST00000428983 2773 ntBASIC14.6□□□□□ -0.07
NPIPB4C9JG80 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPIPB4C9JG80 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms