Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.18■□□□□ 0.18
EBF4Q9BQW3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.18■□□□□ 0.18
EBF4Q9BQW3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 BX276092.5-203ENST00000456199 560 ntBASIC16.17■□□□□ 0.18
EBF4Q9BQW3 POU5F1P6-201ENST00000466990 990 ntBASIC16.17■□□□□ 0.18
EBF4Q9BQW3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 AL590326.2-201ENST00000625139 305 ntBASIC16.17■□□□□ 0.18
EBF4Q9BQW3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EBF4Q9BQW3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 LINC01144-201ENST00000626198 1710 ntBASIC16.16■□□□□ 0.18
EBF4Q9BQW3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.16■□□□□ 0.18
EBF4Q9BQW3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 AC016027.1-202ENST00000607927 1699 ntBASIC16.16■□□□□ 0.18
EBF4Q9BQW3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.16■□□□□ 0.18
EBF4Q9BQW3 AL121672.3-201ENST00000608644 468 ntBASIC16.16■□□□□ 0.18
EBF4Q9BQW3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF4Q9BQW3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms