Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 AL353593.2-201ENST00000602529 1483 ntBASIC13.27□□□□□ -0.29
RNF2Q99496 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 AL122018.1-201ENST00000446607 2310 ntBASIC13.27□□□□□ -0.29
RNF2Q99496 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
RNF2Q99496 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RNF2Q99496 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RNF2Q99496 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RNF2Q99496 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
RNF2Q99496 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RNF2Q99496 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF2Q99496 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.26□□□□□ -0.29
RNF2Q99496 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.26□□□□□ -0.29
RNF2Q99496 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.26□□□□□ -0.29
RNF2Q99496 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RNF2Q99496 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.26□□□□□ -0.29
RNF2Q99496 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 AC104640.1-201ENST00000562617 2109 ntBASIC13.26□□□□□ -0.29
RNF2Q99496 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.26□□□□□ -0.29
RNF2Q99496 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 AD001527.2-201ENST00000622994 785 ntBASIC13.26□□□□□ -0.29
RNF2Q99496 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF2Q99496 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RNF2Q99496 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.26□□□□□ -0.29
RNF2Q99496 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF2Q99496 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
RNF2Q99496 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 LINC00895-201ENST00000629028 1637 ntBASIC13.25□□□□□ -0.29
RNF2Q99496 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RNF2Q99496 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RNF2Q99496 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF2Q99496 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF2Q99496 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms