Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.49■□□□□ 0.71
BRF1Q92994 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
BRF1Q92994 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
BRF1Q92994 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 PCDHA1-201ENST00000378133 2726 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.49■□□□□ 0.71
BRF1Q92994 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
BRF1Q92994 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 PMS2P4-201ENST00000412466 1052 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 MIR3909-201ENST00000579518 119 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 AC021097.1-201ENST00000607902 574 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.49■□□□□ 0.71
BRF1Q92994 AL513190.1-201ENST00000621254 727 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 AC092919.2-201ENST00000623631 1645 ntBASIC19.49■□□□□ 0.71
BRF1Q92994 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.49■□□□□ 0.71
BRF1Q92994 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRF1Q92994 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
BRF1Q92994 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
BRF1Q92994 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.48■□□□□ 0.71
BRF1Q92994 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.48■□□□□ 0.71
BRF1Q92994 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.48■□□□□ 0.71
BRF1Q92994 AL009183.1-201ENST00000603760 355 ntBASIC19.48■□□□□ 0.71
BRF1Q92994 AC020765.3-201ENST00000613051 740 ntBASIC19.48■□□□□ 0.71
BRF1Q92994 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.48■□□□□ 0.71
BRF1Q92994 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
BRF1Q92994 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.48■□□□□ 0.71
BRF1Q92994 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
BRF1Q92994 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.48■□□□□ 0.71
BRF1Q92994 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BRF1Q92994 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
BRF1Q92994 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BRF1Q92994 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.47■□□□□ 0.71
BRF1Q92994 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.47■□□□□ 0.71
BRF1Q92994 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.47■□□□□ 0.71
BRF1Q92994 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.47■□□□□ 0.71
BRF1Q92994 MED15P5-201ENST00000423150 992 ntBASIC19.47■□□□□ 0.71
BRF1Q92994 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.47■□□□□ 0.71
BRF1Q92994 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.47■□□□□ 0.71
BRF1Q92994 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.47■□□□□ 0.71
BRF1Q92994 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.47■□□□□ 0.71
BRF1Q92994 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.47■□□□□ 0.71
BRF1Q92994 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.47■□□□□ 0.71
BRF1Q92994 AC027601.4-201ENST00000611259 610 ntBASIC19.47■□□□□ 0.71
BRF1Q92994 AC092865.6-201ENST00000642101 219 ntBASIC19.47■□□□□ 0.71
BRF1Q92994 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BRF1Q92994 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
BRF1Q92994 MTHFR-217ENST00000641820 1569 ntBASIC19.47■□□□□ 0.71
BRF1Q92994 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms