Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA4DQ92854 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA4DQ92854 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA4DQ92854 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SEMA4DQ92854 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
SEMA4DQ92854 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 YBX2P1-201ENST00000394192 760 ntBASIC17.77■□□□□ 0.44
SEMA4DQ92854 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 POU5F1P6-201ENST00000466990 990 ntBASIC17.77■□□□□ 0.44
SEMA4DQ92854 ALG1L5P-201ENST00000482043 771 ntBASIC17.77■□□□□ 0.44
SEMA4DQ92854 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 AC112191.1-201ENST00000523689 701 ntBASIC17.77■□□□□ 0.44
SEMA4DQ92854 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SEMA4DQ92854 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SEMA4DQ92854 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SEMA4DQ92854 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SEMA4DQ92854 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 AL391005.1-201ENST00000623953 2435 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 WASH6P-202ENST00000359512 1437 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 ADH5P3-201ENST00000433842 1137 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 KRT18P34-201ENST00000488218 1270 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 AL138918.1-201ENST00000568306 659 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.76■□□□□ 0.43
SEMA4DQ92854 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SEMA4DQ92854 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SEMA4DQ92854 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 MTHFR-217ENST00000641820 1569 ntBASIC17.75■□□□□ 0.43
SEMA4DQ92854 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SEMA4DQ92854 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SEMA4DQ92854 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms