Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 PCDHB19P-201ENST00000570871 2371 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 HCG4B-203ENST00000450128 991 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 RPL13AP23-201ENST00000480739 586 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AC145285.3-201ENST00000564603 959 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AL121894.2-201ENST00000602977 491 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AC023141.13-201ENST00000604991 943 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AC021097.1-201ENST00000607902 574 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ME2P1-201ENST00000426028 1970 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 GPAA1P2-202ENST00000606848 1787 ntBASIC16.03■□□□□ 0.16
HIST2H2AA3Q6FI13 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 ZNF259P1-201ENST00000407656 1365 ntBASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 IL9RP2-201ENST00000423948 1312 ntBASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 FDX1P1-201ENST00000449115 551 ntBASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.02■□□□□ 0.16
HIST2H2AA3Q6FI13 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 LINC01144-201ENST00000626198 1710 ntBASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HIST2H2AA3Q6FI13 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 PCGF3-213ENST00000620529 1899 ntBASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST2H2AA3Q6FI13 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms