Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC211486.1-202ENST00000416371 468 ntBASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC211476.1-201ENST00000503899 468 ntBASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AL009183.1-201ENST00000603760 355 ntBASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC079781.4-201ENST00000641908 219 ntBASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC39BQ5VTQ0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AP006288.1-201ENST00000446065 395 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AC004967.1-201ENST00000453589 447 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 MIR4469-201ENST00000583919 79 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AC092902.6-201ENST00000641783 218 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 AL139011.1-202ENST00000642063 584 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 FER1L4-210ENST00000615531 5998 ntBASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC39BQ5VTQ0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 AL391005.1-201ENST00000623953 2435 ntBASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 FAM86C2P-203ENST00000528684 1004 ntBASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 AC021097.1-201ENST00000607902 574 ntBASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms