Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTPN20Q4JDL3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MTHFR-217ENST00000641820 1569 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 WASH6P-202ENST00000359512 1437 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 REXO1L8P-201ENST00000604378 1897 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 OR6D1P-203ENST00000641209 4860 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 FAM58CP-201ENST00000435741 640 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN20Q4JDL3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN20Q4JDL3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN20Q4JDL3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN20Q4JDL3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN20Q4JDL3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 KRT18P34-201ENST00000488218 1270 ntBASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 AL161645.1-201ENST00000622716 1255 ntBASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN20Q4JDL3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC005622.1-201ENST00000636801 1703 ntBASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ADH5P3-201ENST00000433842 1137 ntBASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 ALG1L5P-201ENST00000482043 771 ntBASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPN20Q4JDL3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms