Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CKS1BP61024 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS1BP61024 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS1BP61024 FAM8A6P-201ENST00000407496 1135 ntBASIC11.69□□□□□ -0.54
CKS1BP61024 KRT18P48-201ENST00000434763 852 ntBASIC11.69□□□□□ -0.54
CKS1BP61024 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS1BP61024 AC112698.1-201ENST00000510299 916 ntBASIC11.69□□□□□ -0.54
CKS1BP61024 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.69□□□□□ -0.54
CKS1BP61024 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 AC140113.3-201ENST00000605663 199 ntBASIC11.69□□□□□ -0.54
CKS1BP61024 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CKS1BP61024 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CKS1BP61024 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.69□□□□□ -0.54
CKS1BP61024 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CKS1BP61024 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 SRC-202ENST00000373558 4304 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.68□□□□□ -0.54
CKS1BP61024 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS1BP61024 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CKS1BP61024 ECEL1P2-202ENST00000465689 757 ntBASIC11.68□□□□□ -0.54
CKS1BP61024 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CKS1BP61024 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS1BP61024 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS1BP61024 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.68□□□□□ -0.54
CKS1BP61024 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms