Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RHBDL3P58872 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RHBDL3P58872 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.39■□□□□ 0.7
RHBDL3P58872 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 GNAQP1-201ENST00000444815 1067 ntBASIC19.39■□□□□ 0.69
RHBDL3P58872 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.39■□□□□ 0.69
RHBDL3P58872 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 AC104794.3-201ENST00000566840 1248 ntBASIC19.39■□□□□ 0.69
RHBDL3P58872 AC026979.3-201ENST00000607315 403 ntBASIC19.39■□□□□ 0.69
RHBDL3P58872 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.39■□□□□ 0.69
RHBDL3P58872 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.39■□□□□ 0.69
RHBDL3P58872 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.39■□□□□ 0.69
RHBDL3P58872 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.39■□□□□ 0.69
RHBDL3P58872 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RHBDL3P58872 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RHBDL3P58872 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RHBDL3P58872 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RHBDL3P58872 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RHBDL3P58872 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.38■□□□□ 0.69
RHBDL3P58872 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.38■□□□□ 0.69
RHBDL3P58872 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.38■□□□□ 0.69
RHBDL3P58872 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.38■□□□□ 0.69
RHBDL3P58872 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.38■□□□□ 0.69
RHBDL3P58872 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.38■□□□□ 0.69
RHBDL3P58872 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RHBDL3P58872 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RHBDL3P58872 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.38■□□□□ 0.69
RHBDL3P58872 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
RHBDL3P58872 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 AL136982.4-201ENST00000437689 1740 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RHBDL3P58872 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RHBDL3P58872 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RHBDL3P58872 AC114501.2-201ENST00000439631 535 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 AL139010.1-201ENST00000454878 894 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.37■□□□□ 0.69
RHBDL3P58872 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 MIR4321-201ENST00000592276 80 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 AL132655.2-201ENST00000596276 594 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.37■□□□□ 0.69
RHBDL3P58872 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.37■□□□□ 0.69
RHBDL3P58872 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
RHBDL3P58872 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms