Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1BP28222 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1BP28222 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1BP28222 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HTR1BP28222 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1BP28222 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.52■□□□□ 0.24
HTR1BP28222 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1BP28222 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
HTR1BP28222 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.52■□□□□ 0.24
HTR1BP28222 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.52■□□□□ 0.24
HTR1BP28222 KRT8P23-201ENST00000560090 1207 ntBASIC16.52■□□□□ 0.24
HTR1BP28222 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.52■□□□□ 0.24
HTR1BP28222 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.52■□□□□ 0.24
HTR1BP28222 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.52■□□□□ 0.24
HTR1BP28222 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HTR1BP28222 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
HTR1BP28222 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HTR1BP28222 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.51■□□□□ 0.23
HTR1BP28222 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 MIR4492-201ENST00000581627 80 ntBASIC16.51■□□□□ 0.23
HTR1BP28222 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 AC106028.4-201ENST00000614509 607 ntBASIC16.51■□□□□ 0.23
HTR1BP28222 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.51■□□□□ 0.23
HTR1BP28222 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HTR1BP28222 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HTR1BP28222 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
HTR1BP28222 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.51■□□□□ 0.23
HTR1BP28222 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1BP28222 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1BP28222 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HTR1BP28222 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.5■□□□□ 0.23
HTR1BP28222 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
HTR1BP28222 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1BP28222 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HTR1BP28222 UXT-AS1-201ENST00000590504 1525 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms