Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.79■□□□□ 0.44
CD58P19256 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CD58P19256 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.79■□□□□ 0.44
CD58P19256 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.79■□□□□ 0.44
CD58P19256 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD58P19256 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.78■□□□□ 0.44
CD58P19256 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CD58P19256 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CD58P19256 BX842568.4-201ENST00000421222 227 ntBASIC17.78■□□□□ 0.44
CD58P19256 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.78■□□□□ 0.44
CD58P19256 AC112191.1-201ENST00000523689 701 ntBASIC17.78■□□□□ 0.44
CD58P19256 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.78■□□□□ 0.44
CD58P19256 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 AC010327.4-202ENST00000591484 748 ntBASIC17.78■□□□□ 0.44
CD58P19256 MTDHP5-201ENST00000598980 586 ntBASIC17.78■□□□□ 0.44
CD58P19256 AC021097.1-201ENST00000607902 574 ntBASIC17.78■□□□□ 0.44
CD58P19256 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CD58P19256 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 GPAA1P2-202ENST00000606848 1787 ntBASIC17.78■□□□□ 0.44
CD58P19256 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 PCDH8P1-201ENST00000428983 2773 ntBASIC17.78■□□□□ 0.44
CD58P19256 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.78■□□□□ 0.44
CD58P19256 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD58P19256 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CD58P19256 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
CD58P19256 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CD58P19256 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CD58P19256 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.77■□□□□ 0.44
CD58P19256 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.77■□□□□ 0.44
CD58P19256 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.77■□□□□ 0.44
CD58P19256 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.77■□□□□ 0.44
CD58P19256 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.77■□□□□ 0.44
CD58P19256 AC109635.5-201ENST00000533593 962 ntBASIC17.77■□□□□ 0.44
CD58P19256 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CD58P19256 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD58P19256 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD58P19256 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD58P19256 GGT3P-204ENST00000453783 1664 ntBASIC17.77■□□□□ 0.43
CD58P19256 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.77■□□□□ 0.43
CD58P19256 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CD58P19256 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD58P19256 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CD58P19256 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms