Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.39■□□□□ 0.37
PDGFRAP16234 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFRAP16234 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFRAP16234 AC006538.3-201ENST00000612495 578 ntBASIC17.39■□□□□ 0.37
PDGFRAP16234 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.39■□□□□ 0.37
PDGFRAP16234 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDGFRAP16234 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PDGFRAP16234 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFRAP16234 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 UPF3AP3-201ENST00000420996 769 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFRAP16234 GPX1P2-201ENST00000429271 606 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.38■□□□□ 0.37
PDGFRAP16234 PDPK2P-202ENST00000562415 1191 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.38■□□□□ 0.37
PDGFRAP16234 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 MTDHP5-201ENST00000598980 586 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 AL009183.1-201ENST00000603760 355 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.38■□□□□ 0.37
PDGFRAP16234 GPALPP1-207ENST00000611650 899 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 AC020765.3-201ENST00000613051 740 ntBASIC17.38■□□□□ 0.37
PDGFRAP16234 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFRAP16234 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFRAP16234 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.38■□□□□ 0.37
PDGFRAP16234 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
PDGFRAP16234 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDGFRAP16234 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDGFRAP16234 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.37■□□□□ 0.37
PDGFRAP16234 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PDGFRAP16234 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 RPSAP43-201ENST00000402237 625 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 MCCD1P2-201ENST00000423228 335 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 AC140658.5-201ENST00000438532 169 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 AC074386.1-202ENST00000463561 864 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.37■□□□□ 0.37
PDGFRAP16234 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.37■□□□□ 0.37
PDGFRAP16234 MIR3687-2-201ENST00000577708 61 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 MIR3687-1-201ENST00000614492 61 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 AC139530.3-201ENST00000620344 690 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 LINC01144-201ENST00000626198 1710 ntBASIC17.37■□□□□ 0.37
PDGFRAP16234 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.37■□□□□ 0.37
PDGFRAP16234 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.37■□□□□ 0.37
PDGFRAP16234 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.37■□□□□ 0.37
PDGFRAP16234 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDGFRAP16234 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms