Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 DOC2GP-202ENST00000514950 1163 ntBASIC17.04■□□□□ 0.32
RHOP08100 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.04■□□□□ 0.32
RHOP08100 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.04■□□□□ 0.32
RHOP08100 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.04■□□□□ 0.32
RHOP08100 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.04■□□□□ 0.32
RHOP08100 AC004790.1-201ENST00000612686 536 ntBASIC17.04■□□□□ 0.32
RHOP08100 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.04■□□□□ 0.32
RHOP08100 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.04■□□□□ 0.32
RHOP08100 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.04■□□□□ 0.32
RHOP08100 AC060834.1-201ENST00000443027 2032 ntBASIC17.04■□□□□ 0.32
RHOP08100 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 AC026471.1-201ENST00000564629 3026 ntBASIC17.04■□□□□ 0.32
RHOP08100 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RHOP08100 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
RHOP08100 KRT8P12-202ENST00000472924 1397 ntBASIC17.03■□□□□ 0.32
RHOP08100 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.03■□□□□ 0.32
RHOP08100 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.03■□□□□ 0.32
RHOP08100 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHOP08100 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RHOP08100 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 AC098614.1-201ENST00000368528 745 ntBASIC17.03■□□□□ 0.32
RHOP08100 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RHOP08100 SPDYE18-201ENST00000510091 1050 ntBASIC17.03■□□□□ 0.32
RHOP08100 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.03■□□□□ 0.32
RHOP08100 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.03■□□□□ 0.32
RHOP08100 AL033527.5-202ENST00000641632 1098 ntBASIC17.03■□□□□ 0.32
RHOP08100 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.03■□□□□ 0.32
RHOP08100 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RHOP08100 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RHOP08100 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RHOP08100 AL391825.1-201ENST00000457671 1364 ntBASIC17.02■□□□□ 0.32
RHOP08100 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.02■□□□□ 0.32
RHOP08100 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 GGT4P-201ENST00000623672 1708 ntBASIC17.02■□□□□ 0.32
RHOP08100 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RHOP08100 FZD10-202ENST00000539839 3282 ntBASIC17.02■□□□□ 0.32
RHOP08100 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RHOP08100 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 DGCR5-201ENST00000399539 862 ntBASIC17.02■□□□□ 0.32
RHOP08100 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.02■□□□□ 0.32
RHOP08100 AC087499.6-201ENST00000411576 835 ntBASIC17.02■□□□□ 0.32
RHOP08100 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 AC114501.2-201ENST00000439631 535 ntBASIC17.02■□□□□ 0.32
RHOP08100 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.02■□□□□ 0.32
RHOP08100 AC093004.1-201ENST00000508850 424 ntBASIC17.02■□□□□ 0.32
RHOP08100 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
RHOP08100 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.02■□□□□ 0.32
RHOP08100 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.02■□□□□ 0.32
RHOP08100 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.02■□□□□ 0.32
RHOP08100 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.02■□□□□ 0.31
RHOP08100 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.02■□□□□ 0.31
RHOP08100 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RHOP08100 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RHOP08100 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHOP08100 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHOP08100 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.01■□□□□ 0.31
RHOP08100 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
RHOP08100 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.01■□□□□ 0.31
RHOP08100 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHOP08100 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHOP08100 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RHOP08100 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms