Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 ME2P1-201ENST00000426028 1970 ntBASIC12.47□□□□□ -0.41
SNAI2O43623 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SNAI2O43623 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.47□□□□□ -0.41
SNAI2O43623 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SNAI2O43623 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.47□□□□□ -0.41
SNAI2O43623 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.47□□□□□ -0.41
SNAI2O43623 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 AC010203.1-204ENST00000548782 407 ntBASIC12.47□□□□□ -0.41
SNAI2O43623 RNF126P1-202ENST00000569893 925 ntBASIC12.47□□□□□ -0.41
SNAI2O43623 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC12.47□□□□□ -0.41
SNAI2O43623 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.47□□□□□ -0.41
SNAI2O43623 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 LINC00895-201ENST00000629028 1637 ntBASIC12.47□□□□□ -0.41
SNAI2O43623 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.46□□□□□ -0.41
SNAI2O43623 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 BX664615.1-201ENST00000443558 458 ntBASIC12.46□□□□□ -0.41
SNAI2O43623 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 HOMER2P1-201ENST00000455653 964 ntBASIC12.46□□□□□ -0.41
SNAI2O43623 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 YBX1P2-201ENST00000489612 999 ntBASIC12.46□□□□□ -0.41
SNAI2O43623 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 VENTXP5-201ENST00000523979 775 ntBASIC12.46□□□□□ -0.41
SNAI2O43623 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
SNAI2O43623 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 AC073912.3-201ENST00000624414 853 ntBASIC12.46□□□□□ -0.41
SNAI2O43623 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.46□□□□□ -0.41
SNAI2O43623 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SNAI2O43623 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SNAI2O43623 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNAI2O43623 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SNAI2O43623 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms