Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.03■□□□□ 0.32
COCHO43405 AC027369.6-201ENST00000525520 931 ntBASIC17.03■□□□□ 0.32
COCHO43405 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 BANF1P1-201ENST00000553684 263 ntBASIC17.03■□□□□ 0.32
COCHO43405 MIR4745-201ENST00000577608 62 ntBASIC17.03■□□□□ 0.32
COCHO43405 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.03■□□□□ 0.32
COCHO43405 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.03■□□□□ 0.32
COCHO43405 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.03■□□□□ 0.32
COCHO43405 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.03■□□□□ 0.32
COCHO43405 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COCHO43405 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COCHO43405 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COCHO43405 AL035456.1-201ENST00000456064 1369 ntBASIC17.02■□□□□ 0.32
COCHO43405 AC026471.1-201ENST00000564629 3026 ntBASIC17.02■□□□□ 0.32
COCHO43405 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.02■□□□□ 0.32
COCHO43405 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.02■□□□□ 0.32
COCHO43405 UGT1A2P-201ENST00000454886 866 ntBASIC17.02■□□□□ 0.32
COCHO43405 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COCHO43405 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.02■□□□□ 0.32
COCHO43405 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.02■□□□□ 0.32
COCHO43405 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.02■□□□□ 0.32
COCHO43405 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.02■□□□□ 0.32
COCHO43405 AL138828.2-201ENST00000615812 383 ntBASIC17.02■□□□□ 0.32
COCHO43405 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.02■□□□□ 0.32
COCHO43405 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.02■□□□□ 0.32
COCHO43405 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.02■□□□□ 0.31
COCHO43405 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
COCHO43405 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
COCHO43405 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COCHO43405 LINC01144-201ENST00000626198 1710 ntBASIC17.01■□□□□ 0.31
COCHO43405 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.01■□□□□ 0.31
COCHO43405 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 AC241585.1-201ENST00000433527 519 ntBASIC17.01■□□□□ 0.31
COCHO43405 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 AC105021.1-202ENST00000570572 669 ntBASIC17.01■□□□□ 0.31
COCHO43405 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.01■□□□□ 0.31
COCHO43405 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.01■□□□□ 0.31
COCHO43405 RN7SL828P-201ENST00000607615 303 ntBASIC17.01■□□□□ 0.31
COCHO43405 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COCHO43405 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.01■□□□□ 0.31
COCHO43405 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COCHO43405 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COCHO43405 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COCHO43405 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
COCHO43405 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms