Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 YBX2P1-201ENST00000394192 760 ntBASIC15.73■□□□□ 0.11
LRIT2A6NDA9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT2A6NDA9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 MKNK2P1-201ENST00000437526 628 ntBASIC15.72■□□□□ 0.11
LRIT2A6NDA9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 RARRES2P8-201ENST00000566335 367 ntBASIC15.72■□□□□ 0.11
LRIT2A6NDA9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.72■□□□□ 0.11
LRIT2A6NDA9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRIT2A6NDA9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AKAP8P1-201ENST00000434743 1349 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PCDH8P1-201ENST00000428983 2773 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AL355306.1-201ENST00000415580 579 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AL671277.1-201ENST00000429656 993 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 HTR5BP-201ENST00000430851 1154 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms