Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 AC109322.1-201ENST00000524499 1264 ntBASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 AC107918.2-201ENST00000530817 355 ntBASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 AC099522.2-201ENST00000607001 744 ntBASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA3Q9Y5H0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 AC133963.1-201ENST00000504166 1679 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 BCRP1-201ENST00000444246 691 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM86GP-201ENST00000448322 971 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 RN7SL589P-201ENST00000481268 310 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 AC067863.1-201ENST00000494933 530 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 AC093520.2-201ENST00000561830 333 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 MIR4515-201ENST00000584082 81 ntBASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA3Q9Y5H0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms