Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 ACTBP11-201ENST00000436287 1126 ntBASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 USP32P1-208ENST00000506594 1164 ntBASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 RPSAP52-203ENST00000622976 1023 ntBASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNRF3Q9ULT6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 CROCCP2-202ENST00000412962 2773 ntBASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 AL133338.1-201ENST00000565695 1517 ntBASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 AL391256.1-201ENST00000443260 1855 ntBASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 FO393414.2-201ENST00000405153 598 ntBASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNRF3Q9ULT6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 HIST3H2BA-201ENST00000436555 524 ntBASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 AC018665.1-201ENST00000622927 1362 ntBASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNRF3Q9ULT6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms