Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 TUBB8P12-201ENST00000308911 1335 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 TUBB7P-202ENST00000428444 1305 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 TUBB8P7-204ENST00000567960 1332 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 HMGN1P19-201ENST00000436976 333 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 METTL21AP1-201ENST00000438852 635 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 AC074386.1-202ENST00000463561 864 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 KRT19P2-202ENST00000557173 1012 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 AL078644.1-201ENST00000609881 752 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKIPSDQ9NZQ3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NCKIPSDQ9NZQ3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 AP000344.2-201ENST00000512987 629 ntBASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 AP002472.1-201ENST00000577490 586 ntBASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKIPSDQ9NZQ3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms