Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 AC010336.2-201ENST00000564226 506 ntBASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC10Q9NYD6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 OR8S1-201ENST00000310194 1080 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AC098614.1-201ENST00000368528 745 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 KRT17P7-201ENST00000451704 1104 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AL512361.1-201ENST00000554200 418 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AC140912.1-201ENST00000577171 1054 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 AL033527.5-202ENST00000641632 1098 ntBASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC10Q9NYD6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC10Q9NYD6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 AC044860.1-202ENST00000559481 777 ntBASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 AC006538.1-201ENST00000567905 1585 ntBASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOXC10Q9NYD6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 AC114501.2-201ENST00000439631 535 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 AL139010.1-201ENST00000454878 894 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 HLA-J-202ENST00000469281 1241 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 DOC2GP-202ENST00000514950 1163 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 SDHAP3-202ENST00000515467 728 ntBASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC10Q9NYD6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms