Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.69■□□□□ 0.58
FGD4Q96M96 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.69■□□□□ 0.58
FGD4Q96M96 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 MEIS3P1-201ENST00000495167 958 ntBASIC18.69■□□□□ 0.58
FGD4Q96M96 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 AL589739.1-201ENST00000607720 493 ntBASIC18.69■□□□□ 0.58
FGD4Q96M96 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.69■□□□□ 0.58
FGD4Q96M96 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 CETN4P-206ENST00000642099 2168 ntBASIC18.69■□□□□ 0.58
FGD4Q96M96 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
FGD4Q96M96 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.69■□□□□ 0.58
FGD4Q96M96 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FGD4Q96M96 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
FGD4Q96M96 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FGD4Q96M96 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.68■□□□□ 0.58
FGD4Q96M96 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 COX5BP8-201ENST00000416911 349 ntBASIC18.68■□□□□ 0.58
FGD4Q96M96 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.68■□□□□ 0.58
FGD4Q96M96 AL079307.3-201ENST00000556114 283 ntBASIC18.68■□□□□ 0.58
FGD4Q96M96 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FGD4Q96M96 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
FGD4Q96M96 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.68■□□□□ 0.58
FGD4Q96M96 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FGD4Q96M96 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.67■□□□□ 0.58
FGD4Q96M96 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.67■□□□□ 0.58
FGD4Q96M96 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AC093724.1-201ENST00000448659 1027 ntBASIC18.67■□□□□ 0.58
FGD4Q96M96 RNA5SP410-201ENST00000516285 106 ntBASIC18.67■□□□□ 0.58
FGD4Q96M96 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.67■□□□□ 0.58
FGD4Q96M96 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AL139011.1-202ENST00000642063 584 ntBASIC18.67■□□□□ 0.58
FGD4Q96M96 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FGD4Q96M96 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FGD4Q96M96 AL391256.1-201ENST00000443260 1855 ntBASIC18.67■□□□□ 0.58
FGD4Q96M96 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FGD4Q96M96 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
FGD4Q96M96 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FGD4Q96M96 OR6D1P-202ENST00000641007 5290 ntBASIC18.66■□□□□ 0.58
FGD4Q96M96 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FGD4Q96M96 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FGD4Q96M96 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms