Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 MIR658-201ENST00000385210 100 ntBASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 AC008738.7-201ENST00000609744 511 ntBASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
U2AF1L4Q8WU68 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AC022211.2-201ENST00000585075 2527 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 DGCR5-201ENST00000399539 862 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AL512384.1-201ENST00000406683 331 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 RN7SL752P-201ENST00000463779 287 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 RARRES2P9-201ENST00000565168 469 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AC009407.1-201ENST00000568958 598 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AC007967.4-201ENST00000614700 386 ntBASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.93■□□□□ 0.62
U2AF1L4Q8WU68 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AP006294.1-201ENST00000415407 339 ntBASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AC112492.5-201ENST00000421897 457 ntBASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AC092658.1-201ENST00000505836 891 ntBASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AC132938.2-201ENST00000579188 680 ntBASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AL591163.1-201ENST00000641757 987 ntBASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.92■□□□□ 0.62
U2AF1L4Q8WU68 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
U2AF1L4Q8WU68 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms