Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMEFF1Q8IYR6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 INE1-201ENST00000456273 945 ntBASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AL079307.3-201ENST00000556114 283 ntBASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AC104794.3-201ENST00000566840 1248 ntBASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AL133215.2-201ENST00000609242 977 ntBASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEFF1Q8IYR6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TMEFF1Q8IYR6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 AC010336.2-201ENST00000564226 506 ntBASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 IGHV3-72-202ENST00000621503 303 ntBASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEFF1Q8IYR6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEFF1Q8IYR6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms