Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 AL158212.4-201ENST00000624062 1286 ntBASIC20.5■□□□□ 0.87
COL23A1Q86Y22 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL23A1Q86Y22 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.49■□□□□ 0.87
COL23A1Q86Y22 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 AC010328.2-201ENST00000597698 1111 ntBASIC20.49■□□□□ 0.87
COL23A1Q86Y22 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL23A1Q86Y22 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AC006538.1-201ENST00000567905 1585 ntBASIC20.48■□□□□ 0.87
COL23A1Q86Y22 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AC036164.1-201ENST00000570544 333 ntBASIC20.48■□□□□ 0.87
COL23A1Q86Y22 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 Z97205.2-201ENST00000564697 1639 ntBASIC20.48■□□□□ 0.87
COL23A1Q86Y22 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.48■□□□□ 0.87
COL23A1Q86Y22 AL354751.1-201ENST00000412768 1863 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AL136982.4-201ENST00000437689 1740 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 KRT8P13-201ENST00000463294 1010 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AC068587.3-201ENST00000526613 355 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AC124947.2-201ENST00000547118 1133 ntBASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.47■□□□□ 0.87
COL23A1Q86Y22 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms