Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 AC012569.1-201ENST00000591191 1524 ntBASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKAL1Q5VV42 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 HNRNPDP1-201ENST00000439535 754 ntBASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AL356488.2-201ENST00000602755 427 ntBASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDKAL1Q5VV42 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 FAM185BP-201ENST00000443595 716 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 RNPS1P1-201ENST00000507437 918 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AC012640.2-201ENST00000561606 901 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 IFNL4P1-201ENST00000607083 540 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TP73-AS1-207ENST00000624167 988 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AC016027.1-202ENST00000607927 1699 ntBASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKAL1Q5VV42 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 AC008677.1-201ENST00000519230 1561 ntBASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 AP002414.3-201ENST00000589352 1468 ntBASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKAL1Q5VV42 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms