Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 MRPL3P1-201ENST00000400109 1033 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 CRYGEP-201ENST00000412192 528 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 RHOQP3-201ENST00000437982 621 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AC109635.5-201ENST00000533593 962 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AL662844.1-201ENST00000546340 181 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 KRT126P-201ENST00000549467 1181 ntBASIC17.2■□□□□ 0.34
LRRC38Q5VT99 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 MIR648-201ENST00000385046 94 ntBASIC17.19■□□□□ 0.34
LRRC38Q5VT99 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 RNA5SP415-201ENST00000517246 115 ntBASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 AP001005.1-201ENST00000571755 1248 ntBASIC17.19■□□□□ 0.34
LRRC38Q5VT99 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
LRRC38Q5VT99 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 U82695.1-201ENST00000635752 1889 ntBASIC17.18■□□□□ 0.34
LRRC38Q5VT99 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 AC079776.4-201ENST00000511039 504 ntBASIC17.18■□□□□ 0.34
LRRC38Q5VT99 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms