Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 PDIA3P1-201ENST00000471856 1510 ntBASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDC42BPAQ5VT25 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 REXO1L6P-201ENST00000603433 1515 ntBASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 AC074338.1-201ENST00000416825 156 ntBASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 AC104989.1-201ENST00000519711 778 ntBASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC24.61■■□□□ 1.53
CDC42BPAQ5VT25 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 RPL13P2-201ENST00000440687 659 ntBASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 TARDBPP1-201ENST00000442013 1203 ntBASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC24.6■■□□□ 1.53
CDC42BPAQ5VT25 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 GNRHR2-203ENST00000581100 1187 ntBASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDC42BPAQ5VT25 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 AC233724.13-201ENST00000598383 410 ntBASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 RPS24-214ENST00000613865 538 ntTSL 5 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 AL033527.5-201ENST00000641382 801 ntBASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 AC005622.1-201ENST00000636801 1703 ntBASIC24.58■■□□□ 1.53
CDC42BPAQ5VT25 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
CDC42BPAQ5VT25 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.52
CDC42BPAQ5VT25 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDC42BPAQ5VT25 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDC42BPAQ5VT25 RPF1-202ENST00000370656 724 ntTSL 2 BASIC24.58■■□□□ 1.52
CDC42BPAQ5VT25 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms