Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
MTHFRP42898 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.31■□□□□ 0.36
MTHFRP42898 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
MTHFRP42898 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.31■□□□□ 0.36
MTHFRP42898 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.3■□□□□ 0.36
MTHFRP42898 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 PCDHA12-202ENST00000613593 2588 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.3■□□□□ 0.36
MTHFRP42898 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
MTHFRP42898 DGCR5-201ENST00000399539 862 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 INE1-201ENST00000456273 945 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 ZNF890P-202ENST00000530367 1156 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 AC010336.2-201ENST00000564226 506 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 AC105021.1-202ENST00000570572 669 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 AL162274.1-201ENST00000617191 1098 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 IGHV3-72-202ENST00000621503 303 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MTHFRP42898 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MTHFRP42898 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
MTHFRP42898 AC016396.2-201ENST00000562575 1417 ntBASIC17.3■□□□□ 0.36
MTHFRP42898 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MTHFRP42898 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.29■□□□□ 0.36
MTHFRP42898 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 AL645608.8-201ENST00000606034 2086 ntBASIC17.29■□□□□ 0.36
MTHFRP42898 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MTHFRP42898 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MTHFRP42898 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 AL512384.1-201ENST00000406683 331 ntBASIC17.29■□□□□ 0.36
MTHFRP42898 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
MTHFRP42898 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
MTHFRP42898 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
MTHFRP42898 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.29■□□□□ 0.36
MTHFRP42898 AC104794.3-201ENST00000566840 1248 ntBASIC17.29■□□□□ 0.36
MTHFRP42898 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MTHFRP42898 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
MTHFRP42898 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.29■□□□□ 0.36
MTHFRP42898 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.29■□□□□ 0.36
MTHFRP42898 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MTHFRP42898 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MTHFRP42898 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.28■□□□□ 0.36
MTHFRP42898 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.28■□□□□ 0.36
MTHFRP42898 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
MTHFRP42898 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MTHFRP42898 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 AC093004.1-201ENST00000508850 424 ntBASIC17.28■□□□□ 0.36
MTHFRP42898 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 AL079307.3-201ENST00000556114 283 ntBASIC17.28■□□□□ 0.36
MTHFRP42898 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.28■□□□□ 0.36
MTHFRP42898 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.28■□□□□ 0.36
MTHFRP42898 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms