Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TNFSF9P41273 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFSF9P41273 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.89■□□□□ 0.46
TNFSF9P41273 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
TNFSF9P41273 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFSF9P41273 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFSF9P41273 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFSF9P41273 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFSF9P41273 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TNFSF9P41273 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFSF9P41273 RBPMS2P1-201ENST00000437762 623 ntBASIC17.89■□□□□ 0.45
TNFSF9P41273 AC093724.1-201ENST00000448659 1027 ntBASIC17.89■□□□□ 0.45
TNFSF9P41273 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFSF9P41273 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.89■□□□□ 0.45
TNFSF9P41273 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFSF9P41273 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TNFSF9P41273 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TNFSF9P41273 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFSF9P41273 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFSF9P41273 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFSF9P41273 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.88■□□□□ 0.45
TNFSF9P41273 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TNFSF9P41273 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFSF9P41273 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFSF9P41273 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TNFSF9P41273 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.87■□□□□ 0.45
TNFSF9P41273 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 SPDYE14P-201ENST00000442619 822 ntBASIC17.87■□□□□ 0.45
TNFSF9P41273 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFSF9P41273 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.87■□□□□ 0.45
TNFSF9P41273 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFSF9P41273 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFSF9P41273 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms