Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC124947.2-201ENST00000547118 1133 ntBASIC18.69■□□□□ 0.58
ALDH1A1P00352 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC106872.11-201ENST00000605838 421 ntBASIC18.69■□□□□ 0.58
ALDH1A1P00352 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AP000974.1-201ENST00000623909 2387 ntBASIC18.69■□□□□ 0.58
ALDH1A1P00352 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 AL355864.2-201ENST00000447420 863 ntBASIC18.68■□□□□ 0.58
ALDH1A1P00352 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 HTR7P1-202ENST00000624664 4411 ntBASIC18.68■□□□□ 0.58
ALDH1A1P00352 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALDH1A1P00352 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.68■□□□□ 0.58
ALDH1A1P00352 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALDH1A1P00352 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AL391069.4-201ENST00000609583 481 ntBASIC18.67■□□□□ 0.58
ALDH1A1P00352 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALDH1A1P00352 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ALDH1A1P00352 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.66■□□□□ 0.58
ALDH1A1P00352 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALDH1A1P00352 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms