Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ZNF259P1-201ENST00000407656 1365 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AC245100.5-201ENST00000452108 331 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 PDPK2P-202ENST00000562415 1191 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AL161645.1-201ENST00000622716 1255 ntBASIC14.66□□□□□ -0.06
NPIPB4C9JG80 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPB4C9JG80 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AC068137.2-201ENST00000605408 478 ntBASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AL365203.3-201ENST00000609742 2057 ntBASIC14.65□□□□□ -0.06
NPIPB4C9JG80 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPB4C9JG80 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPB4C9JG80 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms