Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL139327.4-201ENST00000612362 153 ntBASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 KRT8P33-201ENST00000508125 1423 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 BX640514.1-201ENST00000583223 1918 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PEG13-201ENST00000631594 5667 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 POM121L4P-202ENST00000427789 1891 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 TUBB8P6-201ENST00000436895 1288 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 KRT18P16-201ENST00000510337 1294 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 AP001972.5-201ENST00000624624 2338 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms