Protein–RNA interactions for Protein: Q9Y4B6

DCAF1, DDB1- and CUL4-associated factor 1, humanhuman

Predictions only

Length 1,507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF1Q9Y4B6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC31.14■■■□□ 2.58
DCAF1Q9Y4B6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC31.14■■■□□ 2.58
DCAF1Q9Y4B6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
DCAF1Q9Y4B6 INTS4P2-202ENST00000614726 2019 ntBASIC31.14■■■□□ 2.58
DCAF1Q9Y4B6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 CTBP2P5-201ENST00000454986 1264 ntBASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 AC068587.3-201ENST00000526613 355 ntBASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 TIMM17BP1-201ENST00000545713 516 ntBASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
DCAF1Q9Y4B6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 MIR6787-201ENST00000616675 61 ntBASIC31.13■■■□□ 2.57
DCAF1Q9Y4B6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 APRT-204ENST00000563655 709 ntTSL 5 BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 AL603756.1-201ENST00000606511 2163 ntBASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC31.12■■■□□ 2.57
DCAF1Q9Y4B6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 PP12613-201ENST00000424958 2230 ntBASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 AC004987.2-201ENST00000395959 1148 ntBASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 GNRHR2-203ENST00000581100 1187 ntBASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC31.11■■■□□ 2.57
DCAF1Q9Y4B6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 LINC01144-201ENST00000626198 1710 ntBASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 MIR4538-201ENST00000581377 78 ntBASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC31.1■■■□□ 2.57
DCAF1Q9Y4B6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 TARDBPP1-201ENST00000442013 1203 ntBASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
DCAF1Q9Y4B6 CU634019.7-201ENST00000624153 1185 ntBASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms