Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 SLC22A20-204ENST00000530038 1673 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 RNU1-129P-201ENST00000384064 167 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 AC092580.3-201ENST00000430932 139 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 CR383656.12-201ENST00000549567 513 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 U1.21-201ENST00000580816 167 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 AC027307.2-201ENST00000591252 911 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 AC027307.3-201ENST00000594262 1100 ntBASIC16.92■□□□□ 0.3
EBF1Q9UH73 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EBF1Q9UH73 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.92■□□□□ 0.3
EBF1Q9UH73 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.91■□□□□ 0.3
EBF1Q9UH73 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AC241585.1-201ENST00000433527 519 ntBASIC16.91■□□□□ 0.3
EBF1Q9UH73 CRB3P1-201ENST00000449338 276 ntBASIC16.91■□□□□ 0.3
EBF1Q9UH73 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AC091167.2-201ENST00000579581 588 ntBASIC16.91■□□□□ 0.3
EBF1Q9UH73 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AL031055.1-201ENST00000606362 631 ntBASIC16.91■□□□□ 0.3
EBF1Q9UH73 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
EBF1Q9UH73 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EBF1Q9UH73 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 AL023806.1-201ENST00000603994 1649 ntBASIC16.9■□□□□ 0.3
EBF1Q9UH73 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 AC004890.2-204ENST00000481968 304 ntBASIC16.9■□□□□ 0.3
EBF1Q9UH73 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.9■□□□□ 0.3
EBF1Q9UH73 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EBF1Q9UH73 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EBF1Q9UH73 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms