Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC103702.1-201ENST00000548801 2630 ntBASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 AC126755.1-201ENST00000525846 6405 ntBASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 AL450487.1-201ENST00000426799 995 ntBASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 KRT18P27-201ENST00000427733 1299 ntBASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 FAAHP1-202ENST00000446499 1238 ntBASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC68Q9H2F9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 AC091167.2-201ENST00000579581 588 ntBASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 RN7SL510P-201ENST00000581311 263 ntBASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 AL356488.2-201ENST00000602755 427 ntBASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC68Q9H2F9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC68Q9H2F9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC68Q9H2F9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC68Q9H2F9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 NORAD-201ENST00000565493 5339 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 PCDH8P1-201ENST00000428983 2773 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC073621.1-201ENST00000392730 636 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC018712.1-201ENST00000455767 687 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 MPDU1-223ENST00000582151 728 ntBASIC16.7■□□□□ 0.26
CCDC68Q9H2F9 AC008667.4-201ENST00000607370 168 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms