Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM6Q9C030 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM6Q9C030 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM6Q9C030 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 AL645939.2-201ENST00000427340 991 ntBASIC18.26■□□□□ 0.51
TRIM6Q9C030 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 IGHV3-62-201ENST00000520057 340 ntBASIC18.26■□□□□ 0.51
TRIM6Q9C030 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 MIR3909-201ENST00000579518 119 ntBASIC18.26■□□□□ 0.51
TRIM6Q9C030 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM6Q9C030 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM6Q9C030 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.25■□□□□ 0.51
TRIM6Q9C030 WASH6P-202ENST00000359512 1437 ntBASIC18.25■□□□□ 0.51
TRIM6Q9C030 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 AL627223.1-201ENST00000416693 442 ntBASIC18.25■□□□□ 0.51
TRIM6Q9C030 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 AC093028.1-201ENST00000622998 982 ntBASIC18.25■□□□□ 0.51
TRIM6Q9C030 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM6Q9C030 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM6Q9C030 NFIC-211ENST00000641145 8399 ntBASIC18.24■□□□□ 0.51
TRIM6Q9C030 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM6Q9C030 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 AC243562.1-201ENST00000560672 389 ntBASIC18.24■□□□□ 0.51
TRIM6Q9C030 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM6Q9C030 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms