Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
VGLL1Q99990 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
VGLL1Q99990 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.67□□□□□ -0.38
VGLL1Q99990 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.67□□□□□ -0.38
VGLL1Q99990 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.67□□□□□ -0.38
VGLL1Q99990 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 AC116407.4-201ENST00000623319 1061 ntBASIC12.67□□□□□ -0.38
VGLL1Q99990 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 SIGLEC16-201ENST00000599858 1437 ntBASIC12.67□□□□□ -0.38
VGLL1Q99990 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 MTHFR-217ENST00000641820 1569 ntBASIC12.67□□□□□ -0.38
VGLL1Q99990 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.67□□□□□ -0.38
VGLL1Q99990 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VGLL1Q99990 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
VGLL1Q99990 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VGLL1Q99990 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.66□□□□□ -0.38
VGLL1Q99990 AC006277.1-201ENST00000624348 1610 ntBASIC12.66□□□□□ -0.38
VGLL1Q99990 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.66□□□□□ -0.38
VGLL1Q99990 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.66□□□□□ -0.38
VGLL1Q99990 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.66□□□□□ -0.38
VGLL1Q99990 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.66□□□□□ -0.38
VGLL1Q99990 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.66□□□□□ -0.38
VGLL1Q99990 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.66□□□□□ -0.38
VGLL1Q99990 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VGLL1Q99990 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 AL365203.3-201ENST00000609742 2057 ntBASIC12.66□□□□□ -0.38
VGLL1Q99990 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VGLL1Q99990 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VGLL1Q99990 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.66□□□□□ -0.38
VGLL1Q99990 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VGLL1Q99990 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.65□□□□□ -0.38
VGLL1Q99990 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.65□□□□□ -0.38
VGLL1Q99990 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VGLL1Q99990 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms