Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ABCA3Q99758 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.64■■□□□ 1.06
ABCA3Q99758 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC21.64■■□□□ 1.06
ABCA3Q99758 CALR4P-201ENST00000431943 946 ntBASIC21.64■■□□□ 1.06
ABCA3Q99758 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ABCA3Q99758 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC21.64■■□□□ 1.06
ABCA3Q99758 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.64■■□□□ 1.06
ABCA3Q99758 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC21.64■■□□□ 1.06
ABCA3Q99758 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.64■■□□□ 1.06
ABCA3Q99758 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.64■■□□□ 1.06
ABCA3Q99758 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.06
ABCA3Q99758 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.64■■□□□ 1.05
ABCA3Q99758 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.64■■□□□ 1.05
ABCA3Q99758 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ABCA3Q99758 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
ABCA3Q99758 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 AC135050.7-201ENST00000624508 2218 ntBASIC21.63■■□□□ 1.05
ABCA3Q99758 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 TARDBPP1-201ENST00000442013 1203 ntBASIC21.63■■□□□ 1.05
ABCA3Q99758 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.63■■□□□ 1.05
ABCA3Q99758 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.63■■□□□ 1.05
ABCA3Q99758 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ABCA3Q99758 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ABCA3Q99758 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 AC006538.1-201ENST00000567905 1585 ntBASIC21.63■■□□□ 1.05
ABCA3Q99758 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.63■■□□□ 1.05
ABCA3Q99758 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ABCA3Q99758 KRT18P64-201ENST00000434946 1219 ntBASIC21.63■■□□□ 1.05
ABCA3Q99758 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.63■■□□□ 1.05
ABCA3Q99758 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.62■■□□□ 1.05
ABCA3Q99758 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
ABCA3Q99758 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ABCA3Q99758 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.62■■□□□ 1.05
ABCA3Q99758 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.62■■□□□ 1.05
ABCA3Q99758 AC105129.2-201ENST00000559536 390 ntBASIC21.62■■□□□ 1.05
ABCA3Q99758 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.62■■□□□ 1.05
ABCA3Q99758 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
ABCA3Q99758 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ABCA3Q99758 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC21.61■■□□□ 1.05
ABCA3Q99758 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 TIMM17BP1-201ENST00000545713 516 ntBASIC21.61■■□□□ 1.05
ABCA3Q99758 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.61■■□□□ 1.05
ABCA3Q99758 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.61■■□□□ 1.05
ABCA3Q99758 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.61■■□□□ 1.05
ABCA3Q99758 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ABCA3Q99758 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.61■■□□□ 1.05
ABCA3Q99758 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ABCA3Q99758 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 MIR663B-201ENST00000408361 115 ntBASIC21.6■■□□□ 1.05
ABCA3Q99758 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms