Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 AL009183.1-201ENST00000603760 355 ntBASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDLIM5Q96HC4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 AC022188.1-201ENST00000620960 1664 ntBASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDLIM5Q96HC4 AC104109.2-201ENST00000602919 1418 ntBASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AL592424.1-201ENST00000563624 1536 ntBASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AC005622.1-201ENST00000636801 1703 ntBASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AC140658.5-201ENST00000438532 169 ntBASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 RPL13AP23-201ENST00000480739 586 ntBASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDLIM5Q96HC4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 AC064836.3-201ENST00000607928 673 ntBASIC16.19■□□□□ 0.18
PDLIM5Q96HC4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms