Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HERC6Q8IVU3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 RAB43P1-201ENST00000561790 589 ntBASIC17.9■□□□□ 0.46
HERC6Q8IVU3 WASH4P-201ENST00000564273 1246 ntBASIC17.9■□□□□ 0.46
HERC6Q8IVU3 AL133215.2-201ENST00000609242 977 ntBASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 AL021920.2-201ENST00000624828 1351 ntBASIC17.9■□□□□ 0.46
HERC6Q8IVU3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.9■□□□□ 0.46
HERC6Q8IVU3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
HERC6Q8IVU3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 SPDYE19P-201ENST00000338590 713 ntBASIC17.89■□□□□ 0.45
HERC6Q8IVU3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AC093004.1-201ENST00000508850 424 ntBASIC17.89■□□□□ 0.45
HERC6Q8IVU3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 DOC2GP-202ENST00000514950 1163 ntBASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HERC6Q8IVU3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 AC004790.1-201ENST00000612686 536 ntBASIC17.88■□□□□ 0.45
HERC6Q8IVU3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.88■□□□□ 0.45
HERC6Q8IVU3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HERC6Q8IVU3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms