Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 TPM4P1-201ENST00000436100 807 ntBASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 AL662844.1-201ENST00000546340 181 ntBASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF549Q6P9A3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 HMGA1P7-201ENST00000406908 502 ntBASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 HCG4B-203ENST00000450128 991 ntBASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 MIR4515-201ENST00000584082 81 ntBASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 MTHFR-217ENST00000641820 1569 ntBASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 LINC02199-201ENST00000506655 2702 ntBASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF549Q6P9A3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ZNF549Q6P9A3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms